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  • Use cases
  • Changelog

Site Navigation

  • Use cases
  • Changelog
  • Data flow
    • Project flow
    • Analysis flow
  • Registries
    • CellTypist
    • Gene Ontology (GO)
    • Standardize metadata on-the-fly
  • Data types
    • scRNA-seq
      • Standardize and append a batch of data
      • Query artifacts
      • Analyze a collection in memory
      • Train an ML model on a collection
      • Convert a number of array shards to a single array store
    • Bulk RNA-seq
    • Flow cytometry
      • Append a new shard of data
      • Query & integrate data
      • Analyze the collection and save a result
    • Spatial
    • Multi-modal
  • Access public ontologies
    • Gene
    • Protein
    • Organism
    • Cell line
    • Cell type
    • Cell marker
    • Tissue
    • Disease
    • Phenotype
    • Pathway
    • Experimental factor
    • Developmental stage
    • Ethnicity

Data types#

  • scRNA-seq
  • Bulk RNA-seq
  • Flow cytometry
  • Spatial
  • Multi-modal

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Standardize metadata on-the-fly

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scRNA-seq
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